Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 CUP2YGL166W 678 nt6.09□□□□□ -1.43
UPF3P48412 MED4YOR174W 855 nt6.09□□□□□ -1.43
UPF3P48412 SCO2YBR024W 906 nt6.09□□□□□ -1.43
UPF3P48412 PTC4YBR125C 1182 nt6.09□□□□□ -1.43
UPF3P48412 GIT1YCR098C 1557 nt6.09□□□□□ -1.43
UPF3P48412 URA7YBL039C 1740 nt6.08□□□□□ -1.44
UPF3P48412 OPI7YDR360W 435 nt6.08□□□□□ -1.44
UPF3P48412 YNR048WYNR048W 1182 nt6.08□□□□□ -1.44
UPF3P48412 RAP1YNL216W 2484 nt6.08□□□□□ -1.44
UPF3P48412 YDR187CYDR187C 519 nt6.07□□□□□ -1.44
UPF3P48412 POP5YAL033W 522 nt6.07□□□□□ -1.44
UPF3P48412 SCP1YOR367W 603 nt6.07□□□□□ -1.44
UPF3P48412 RPL21AYBR191W 483 nt6.07□□□□□ -1.44
UPF3P48412 VHT1YGR065C 1782 nt6.07□□□□□ -1.44
UPF3P48412 PPT1YGR123C 1542 nt6.06□□□□□ -1.44
UPF3P48412 COA1YIL157C 594 nt6.06□□□□□ -1.44
UPF3P48412 GCV3YAL044C 513 nt6.06□□□□□ -1.44
UPF3P48412 OCA1YNL099C 717 nt6.06□□□□□ -1.44
UPF3P48412 CDC1YDR182W 1476 nt6.06□□□□□ -1.44
UPF3P48412 RIO1YOR119C 1455 nt6.06□□□□□ -1.44
UPF3P48412 TPO3YPR156C 1869 nt6.06□□□□□ -1.44
UPF3P48412 PCS60YBR222C 1632 nt6.06□□□□□ -1.44
UPF3P48412 UIP5YKR044W 1332 nt6.05□□□□□ -1.44
UPF3P48412 NOP2YNL061W 1857 nt6.05□□□□□ -1.44
UPF3P48412 UPS3YDR185C 540 nt6.05□□□□□ -1.44
UPF3P48412 GPI11YDR302W 660 nt6.05□□□□□ -1.44
UPF3P48412 ARP1YHR129C 1155 nt6.05□□□□□ -1.44
UPF3P48412 CIS3YJL158C 684 nt6.05□□□□□ -1.44
UPF3P48412 RRT7YLL030C 342 nt6.05□□□□□ -1.44
UPF3P48412 FPR3YML074C 1236 nt6.05□□□□□ -1.44
UPF3P48412 QRI1YDL103C 1434 nt6.05□□□□□ -1.44
UPF3P48412 PTC3YBL056W 1407 nt6.05□□□□□ -1.44
UPF3P48412 KTR5YNL029C 1569 nt6.05□□□□□ -1.44
UPF3P48412 PFK2YMR205C 2880 nt6.04□□□□□ -1.44
UPF3P48412 YGR291CYGR291C 222 nt6.04□□□□□ -1.44
UPF3P48412 COX17YLL009C 210 nt6.04□□□□□ -1.44
UPF3P48412 YMC1YPR058W 924 nt6.04□□□□□ -1.44
UPF3P48412 TAE1YBR261C 699 nt6.04□□□□□ -1.44
UPF3P48412 YBR298C-AYBR298C-A 222 nt6.04□□□□□ -1.44
UPF3P48412 IMA5YJL216C 1746 nt6.04□□□□□ -1.44
UPF3P48412 YEL020CYEL020C 1683 nt6.04□□□□□ -1.44
UPF3P48412 EIS1YMR031C 2532 nt6.03□□□□□ -1.44
UPF3P48412 YEA6YEL006W 1008 nt6.03□□□□□ -1.44
UPF3P48412 SRY1YKL218C 981 nt6.03□□□□□ -1.44
UPF3P48412 DRE2YKR071C 1047 nt6.03□□□□□ -1.44
UPF3P48412 CWC25YNL245C 540 nt6.03□□□□□ -1.44
UPF3P48412 PHA2YNL316C 1005 nt6.03□□□□□ -1.44
UPF3P48412 AMD2YDR242W 1650 nt6.03□□□□□ -1.44
UPF3P48412 CSC1YLR241W 2349 nt6.02□□□□□ -1.45
UPF3P48412 RTT103YDR289C 1230 nt6.02□□□□□ -1.45
UPF3P48412 MDH1YKL085W 1005 nt6.02□□□□□ -1.45
UPF3P48412 NPT1YOR209C 1290 nt6.02□□□□□ -1.45
UPF3P48412 PYC2YBR218C 3543 nt6.02□□□□□ -1.45
UPF3P48412 YLL067CYLL067C 3618 nt6.01□□□□□ -1.45
UPF3P48412 BUG1YDL099W 1026 nt6.01□□□□□ -1.45
UPF3P48412 TMT1YER175C 900 nt6.01□□□□□ -1.45
UPF3P48412 YHR070C-AYHR070C-A 411 nt6.01□□□□□ -1.45
UPF3P48412 RPR2YIR015W 435 nt6.01□□□□□ -1.45
UPF3P48412 RSA3YLR221C 663 nt6.01□□□□□ -1.45
UPF3P48412 YMR122CYMR122C 375 nt6.01□□□□□ -1.45
UPF3P48412 OSW2YLR054C 2175 nt6.01□□□□□ -1.45
UPF3P48412 RPN5YDL147W 1338 nt6□□□□□ -1.45
UPF3P48412 EXG1YLR300W 1347 nt6□□□□□ -1.45
UPF3P48412 ZWF1YNL241C 1518 nt6□□□□□ -1.45
UPF3P48412 DIT1YDR403W 1611 nt6□□□□□ -1.45
UPF3P48412 MET7YOR241W 1647 nt6□□□□□ -1.45
UPF3P48412 HRQ1YDR291W 3234 nt6□□□□□ -1.45
UPF3P48412 HMLALPHA1YCL066W 528 nt6□□□□□ -1.45
UPF3P48412 MATALPHA1YCR040W 528 nt6□□□□□ -1.45
UPF3P48412 COX9YDL067C 180 nt6□□□□□ -1.45
UPF3P48412 PPM1YDR435C 987 nt6□□□□□ -1.45
UPF3P48412 MSP1YGR028W 1089 nt6□□□□□ -1.45
UPF3P48412 YML6YML025C 861 nt6□□□□□ -1.45
UPF3P48412 YMR147WYMR147W 672 nt6□□□□□ -1.45
UPF3P48412 SEC17YBL050W 879 nt6□□□□□ -1.45
UPF3P48412 YNL108CYNL108C 813 nt6□□□□□ -1.45
UPF3P48412 PRE2YPR103W 864 nt6□□□□□ -1.45
UPF3P48412 HOS2YGL194C 1359 nt6□□□□□ -1.45
UPF3P48412 DUG1YFR044C 1446 nt5.99□□□□□ -1.45
UPF3P48412 TKL1YPR074C 2043 nt5.99□□□□□ -1.45
UPF3P48412 MCH1YDL054C 1461 nt5.99□□□□□ -1.45
UPF3P48412 MMR1YLR190W 1476 nt5.99□□□□□ -1.45
UPF3P48412 RAM1YDL090C 1296 nt5.99□□□□□ -1.45
UPF3P48412 TFG2YGR005C 1203 nt5.99□□□□□ -1.45
UPF3P48412 YIL077CYIL077C 963 nt5.99□□□□□ -1.45
UPF3P48412 YIR042CYIR042C 711 nt5.99□□□□□ -1.45
UPF3P48412 YJR084WYJR084W 1272 nt5.99□□□□□ -1.45
UPF3P48412 RPS3YNL178W 723 nt5.99□□□□□ -1.45
UPF3P48412 SKN1YGR143W 2316 nt5.99□□□□□ -1.45
UPF3P48412 YIL092WYIL092W 1902 nt5.99□□□□□ -1.45
UPF3P48412 YMR279CYMR279C 1623 nt5.99□□□□□ -1.45
UPF3P48412 ATG1YGL180W 2694 nt5.98□□□□□ -1.45
UPF3P48412 SRG1SRG1 551 nt5.98□□□□□ -1.45
UPF3P48412 YGL235WYGL235W 537 nt5.98□□□□□ -1.45
UPF3P48412 YHR095WYHR095W 495 nt5.98□□□□□ -1.45
UPF3P48412 MPC2YHR162W 390 nt5.98□□□□□ -1.45
UPF3P48412 HEM15YOR176W 1182 nt5.98□□□□□ -1.45
UPF3P48412 DAP1YPL170W 459 nt5.98□□□□□ -1.45
UPF3P48412 YPR123CYPR123C 435 nt5.98□□□□□ -1.45
UPF3P48412 PRP24YMR268C 1335 nt5.98□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 102.7 ms