Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
TRAF3IP2O43734 ABHD17AP5-201ENST00000580133 923 ntBASIC21.3■■□□□ 1
TRAF3IP2O43734 AC097639.1-201ENST00000565519 1891 ntBASIC21.3■■□□□ 1
TRAF3IP2O43734 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRAF3IP2O43734 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP2O43734 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP2O43734 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAF3IP2O43734 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.29■■□□□ 1
TRAF3IP2O43734 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRAF3IP2O43734 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.29■■□□□ 1
TRAF3IP2O43734 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP2O43734 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.28■■□□□ 1
TRAF3IP2O43734 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP2O43734 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRAF3IP2O43734 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRAF3IP2O43734 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRAF3IP2O43734 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.28■■□□□ 1
TRAF3IP2O43734 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.28■■□□□ 1
TRAF3IP2O43734 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP2O43734 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP2O43734 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRAF3IP2O43734 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.28■■□□□ 1
TRAF3IP2O43734 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP2O43734 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP2O43734 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRAF3IP2O43734 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAF3IP2O43734 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.27■■□□□ 1
TRAF3IP2O43734 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAF3IP2O43734 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.27■□□□□ 0.99
TRAF3IP2O43734 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRAF3IP2O43734 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRAF3IP2O43734 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAF3IP2O43734 SPCS2P3-201ENST00000500401 656 ntBASIC21.26■□□□□ 0.99
TRAF3IP2O43734 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAF3IP2O43734 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAF3IP2O43734 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP2O43734 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP2O43734 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP2O43734 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAF3IP2O43734 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP2O43734 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP2O43734 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
TRAF3IP2O43734 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.24■□□□□ 0.99
TRAF3IP2O43734 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAF3IP2O43734 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRAF3IP2O43734 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP2O43734 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP2O43734 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP2O43734 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRAF3IP2O43734 KRT18P60-201ENST00000312876 1297 ntBASIC21.23■□□□□ 0.99
TRAF3IP2O43734 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.23■□□□□ 0.99
TRAF3IP2O43734 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.23■□□□□ 0.99
TRAF3IP2O43734 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAF3IP2O43734 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP2O43734 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP2O43734 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.22■□□□□ 0.99
TRAF3IP2O43734 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAF3IP2O43734 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRAF3IP2O43734 NTF6A-201ENST00000591175 560 ntBASIC21.22■□□□□ 0.99
TRAF3IP2O43734 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRAF3IP2O43734 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.21■□□□□ 0.99
TRAF3IP2O43734 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAF3IP2O43734 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP2O43734 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP2O43734 KRT18P10-201ENST00000388836 1287 ntBASIC21.21■□□□□ 0.99
TRAF3IP2O43734 DUX4L9-201ENST00000449051 1259 ntBASIC21.21■□□□□ 0.99
TRAF3IP2O43734 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.21■□□□□ 0.99
TRAF3IP2O43734 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP2O43734 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAF3IP2O43734 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP2O43734 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP2O43734 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP2O43734 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP2O43734 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP2O43734 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAF3IP2O43734 AC129492.7-201ENST00000622992 756 ntBASIC21.2■□□□□ 0.98
TRAF3IP2O43734 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRAF3IP2O43734 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
TRAF3IP2O43734 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAF3IP2O43734 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP2O43734 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP2O43734 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP2O43734 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP2O43734 AC018755.3-202ENST00000596210 929 ntBASIC21.19■□□□□ 0.98
TRAF3IP2O43734 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRAF3IP2O43734 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP2O43734 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.19■□□□□ 0.98
TRAF3IP2O43734 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAF3IP2O43734 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP2O43734 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
TRAF3IP2O43734 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP2O43734 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.18■□□□□ 0.98
TRAF3IP2O43734 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRAF3IP2O43734 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRAF3IP2O43734 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
TRAF3IP2O43734 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP2O43734 MIR6765-201ENST00000614092 87 ntBASIC21.17■□□□□ 0.98
TRAF3IP2O43734 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP2O43734 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAF3IP2O43734 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms