Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV25A0A0B4J276 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRAV25A0A0B4J276 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV25A0A0B4J276 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV25A0A0B4J276 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV25A0A0B4J276 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV25A0A0B4J276 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV25A0A0B4J276 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV25A0A0B4J276 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAV25A0A0B4J276 AC019171.1-201ENST00000601251 1056 ntBASIC17.97■□□□□ 0.47
TRAV25A0A0B4J276 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV25A0A0B4J276 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 DUSP8P4-201ENST00000399538 1761 ntBASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV25A0A0B4J276 AC145676.1-201ENST00000514988 2004 ntBASIC17.95■□□□□ 0.46
TRAV25A0A0B4J276 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV25A0A0B4J276 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV25A0A0B4J276 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV25A0A0B4J276 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV25A0A0B4J276 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV25A0A0B4J276 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV25A0A0B4J276 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV25A0A0B4J276 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV25A0A0B4J276 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV25A0A0B4J276 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV25A0A0B4J276 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV25A0A0B4J276 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV25A0A0B4J276 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV25A0A0B4J276 AC091060.1-201ENST00000623524 1766 ntBASIC17.93■□□□□ 0.46
TRAV25A0A0B4J276 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV25A0A0B4J276 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 ERN1-208ENST00000606895 2068 ntBASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 LONRF2P2-201ENST00000439212 571 ntBASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV25A0A0B4J276 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 AC097639.1-201ENST00000565519 1891 ntBASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV25A0A0B4J276 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV25A0A0B4J276 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRAV25A0A0B4J276 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV25A0A0B4J276 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRAV25A0A0B4J276 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRAV25A0A0B4J276 AC022616.5-201ENST00000518796 181 ntBASIC17.9■□□□□ 0.46
TRAV25A0A0B4J276 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV25A0A0B4J276 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV25A0A0B4J276 AC096887.2-201ENST00000623443 1957 ntBASIC17.9■□□□□ 0.46
TRAV25A0A0B4J276 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV25A0A0B4J276 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV25A0A0B4J276 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV25A0A0B4J276 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.88■□□□□ 0.45
TRAV25A0A0B4J276 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV25A0A0B4J276 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV25A0A0B4J276 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV25A0A0B4J276 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV25A0A0B4J276 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV25A0A0B4J276 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV25A0A0B4J276 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms