Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-8A0A0A6YYG3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRBV6-8A0A0A6YYG3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.58■□□□□ 0.24
TRBV6-8A0A0A6YYG3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRBV6-8A0A0A6YYG3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-8A0A0A6YYG3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.57■□□□□ 0.24
TRBV6-8A0A0A6YYG3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.57■□□□□ 0.24
TRBV6-8A0A0A6YYG3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-8A0A0A6YYG3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-8A0A0A6YYG3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.57■□□□□ 0.24
TRBV6-8A0A0A6YYG3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRBV6-8A0A0A6YYG3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRBV6-8A0A0A6YYG3 AC138932.3-201ENST00000567634 1902 ntBASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRBV6-8A0A0A6YYG3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 RP9P-202ENST00000450133 1212 ntBASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRBV6-8A0A0A6YYG3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-8A0A0A6YYG3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-8A0A0A6YYG3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.53■□□□□ 0.24
TRBV6-8A0A0A6YYG3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-8A0A0A6YYG3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-8A0A0A6YYG3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRBV6-8A0A0A6YYG3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-8A0A0A6YYG3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-8A0A0A6YYG3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.52■□□□□ 0.24
TRBV6-8A0A0A6YYG3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-8A0A0A6YYG3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-8A0A0A6YYG3 MIR4449-201ENST00000578365 66 ntBASIC16.52■□□□□ 0.24
TRBV6-8A0A0A6YYG3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-8A0A0A6YYG3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-8A0A0A6YYG3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRBV6-8A0A0A6YYG3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.52■□□□□ 0.23
TRBV6-8A0A0A6YYG3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-8A0A0A6YYG3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRBV6-8A0A0A6YYG3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.51■□□□□ 0.23
TRBV6-8A0A0A6YYG3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-8A0A0A6YYG3 AC093323.1-202ENST00000635031 2045 ntBASIC16.51■□□□□ 0.23
TRBV6-8A0A0A6YYG3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRBV6-8A0A0A6YYG3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-8A0A0A6YYG3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-8A0A0A6YYG3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-8A0A0A6YYG3 AC093536.1-201ENST00000569153 554 ntBASIC16.5■□□□□ 0.23
TRBV6-8A0A0A6YYG3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-8A0A0A6YYG3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRBV6-8A0A0A6YYG3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRBV6-8A0A0A6YYG3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 SLC6A10P-202ENST00000431994 2058 ntBASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 AC007029.1-201ENST00000604183 313 ntBASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 AP003733.4-201ENST00000623785 1697 ntBASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRBV6-8A0A0A6YYG3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-8A0A0A6YYG3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-8A0A0A6YYG3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRBV6-8A0A0A6YYG3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-8A0A0A6YYG3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRBV6-8A0A0A6YYG3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-8A0A0A6YYG3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV6-8A0A0A6YYG3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms