Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 AC046185.3-201ENST00000623228 1824 ntBASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 AL135999.2-201ENST00000622438 1686 ntBASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGA6Q9Y5G7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 LYSMD4-203ENST00000378904 2122 ntBASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 AC027612.4-201ENST00000605371 583 ntBASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 REXO1L3P-201ENST00000622202 1288 ntBASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 AL513210.1-201ENST00000629608 234 ntBASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 AC092902.6-201ENST00000641783 218 ntBASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHGA6Q9Y5G7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 AC004835.2-201ENST00000603762 682 ntBASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 LINC02084-201ENST00000606069 1096 ntBASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHGA6Q9Y5G7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms