Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RN7SL190P-201ENST00000582519 257 ntBASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 MIR8072-201ENST00000614241 80 ntBASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 KRT8P12-202ENST00000472924 1397 ntBASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 AC139713.2-201ENST00000641328 2723 ntBASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 AC135776.1-201ENST00000319817 2481 ntBASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.03■□□□□ 0.8
ZC3H4Q9UPT8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 AC099548.2-209ENST00000480264 625 ntBASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 AC092337.1-201ENST00000568699 1129 ntBASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 AC010319.3-201ENST00000597028 470 ntBASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 FLJ13224-201ENST00000313737 1514 ntBASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.02■□□□□ 0.8
ZC3H4Q9UPT8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
ZC3H4Q9UPT8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.01■□□□□ 0.79
ZC3H4Q9UPT8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms