Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC092068.3-201ENST00000587894 2016 ntBASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 AC069120.2-201ENST00000524091 540 ntBASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 AC006277.1-201ENST00000624348 1610 ntBASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 AL035633.1-201ENST00000406139 838 ntBASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 MIR4453-201ENST00000584019 89 ntBASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 AC138761.1-201ENST00000584393 385 ntBASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 AC012313.1-201ENST00000593393 3059 ntBASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRIT1Q9P2V4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 LTB4R2-202ENST00000528054 3092 ntBASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 COX20P2-201ENST00000452636 358 ntBASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.09■□□□□ 0.17
LRIT1Q9P2V4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms