Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 AC092338.2-201ENST00000568827 1415 ntBASIC19.85■□□□□ 0.77
RTN4Q9NQC3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTN4Q9NQC3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 GCSHP5-201ENST00000443090 522 ntBASIC19.84■□□□□ 0.77
RTN4Q9NQC3 AC009065.1-201ENST00000564055 1225 ntBASIC19.84■□□□□ 0.77
RTN4Q9NQC3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 AC112497.1-201ENST00000624824 639 ntBASIC19.84■□□□□ 0.77
RTN4Q9NQC3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RTN4Q9NQC3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 AC005089.1-201ENST00000619486 2241 ntBASIC19.83■□□□□ 0.77
RTN4Q9NQC3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 OR13I1P-201ENST00000609811 1264 ntBASIC19.83■□□□□ 0.77
RTN4Q9NQC3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RTN4Q9NQC3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 AC132938.6-201ENST00000623828 1655 ntBASIC19.83■□□□□ 0.76
RTN4Q9NQC3 AC116353.5-201ENST00000638148 1699 ntBASIC19.83■□□□□ 0.76
RTN4Q9NQC3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTN4Q9NQC3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 ZNF226-204ENST00000454662 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 AP003071.4-201ENST00000562276 1284 ntBASIC19.82■□□□□ 0.76
RTN4Q9NQC3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 AC137695.1-201ENST00000604126 489 ntBASIC19.82■□□□□ 0.76
RTN4Q9NQC3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RTN4Q9NQC3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms