Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
KIAA1549Q9HCM3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 BCRP1-201ENST00000444246 691 ntBASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 KRT18P34-201ENST00000488218 1270 ntBASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 AC142381.1-201ENST00000426099 345 ntBASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 AC093724.1-201ENST00000448659 1027 ntBASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 AC067863.1-201ENST00000494933 530 ntBASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.78□□□□□ -0.04
KIAA1549Q9HCM3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 AP3S2-216ENST00000617003 1561 ntBASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 AC140878.1-201ENST00000565277 250 ntBASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 AC015911.4-201ENST00000588022 1070 ntBASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 AP001350.2-201ENST00000625104 1094 ntBASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KIAA1549Q9HCM3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 AL512652.2-201ENST00000625156 1716 ntBASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KIAA1549Q9HCM3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 BANF1P1-201ENST00000553684 263 ntBASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.76□□□□□ -0.05
KIAA1549Q9HCM3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms