Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 BX276092.7-203ENST00000637198 1536 ntBASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 MIR661-201ENST00000384842 89 ntBASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 AC005237.2-201ENST00000434368 219 ntBASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 AC112191.1-201ENST00000523689 701 ntBASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE5Q9HCH3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE5Q9HCH3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.21■□□□□ 0.18
CPNE5Q9HCH3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE5Q9HCH3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.21■□□□□ 0.18
CPNE5Q9HCH3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 AC009949.1-201ENST00000623048 1830 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 MIR943-201ENST00000401286 94 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 TFAMP1-201ENST00000412727 736 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 CNN2P2-201ENST00000443536 909 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 CNN2P3-201ENST00000450201 906 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 GAPDHP21-201ENST00000450301 1010 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 UGT1A2P-201ENST00000454886 866 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 DUX4L17-201ENST00000557360 1267 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 AC109462.3-201ENST00000573934 613 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 AL008721.1-201ENST00000609964 604 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 AL136317.3-201ENST00000618497 906 ntBASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
CPNE5Q9HCH3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE5Q9HCH3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CPNE5Q9HCH3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPNE5Q9HCH3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms