Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFCC1Q9HA90 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 WASH6P-202ENST00000359512 1437 ntBASIC19.42■□□□□ 0.7
EFCC1Q9HA90 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.42■□□□□ 0.7
EFCC1Q9HA90 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.42■□□□□ 0.7
EFCC1Q9HA90 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 GIMAP3P-201ENST00000495150 836 ntBASIC19.42■□□□□ 0.7
EFCC1Q9HA90 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 AC027307.2-201ENST00000591252 911 ntBASIC19.42■□□□□ 0.7
EFCC1Q9HA90 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFCC1Q9HA90 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 MIR346-201ENST00000362234 95 ntBASIC19.41■□□□□ 0.7
EFCC1Q9HA90 AC098614.1-201ENST00000368528 745 ntBASIC19.41■□□□□ 0.7
EFCC1Q9HA90 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 AC109635.5-201ENST00000533593 962 ntBASIC19.41■□□□□ 0.7
EFCC1Q9HA90 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 AC012317.2-201ENST00000623305 2251 ntBASIC19.41■□□□□ 0.7
EFCC1Q9HA90 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.41■□□□□ 0.7
EFCC1Q9HA90 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.4■□□□□ 0.7
EFCC1Q9HA90 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
EFCC1Q9HA90 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
EFCC1Q9HA90 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EFCC1Q9HA90 ABALON-201ENST00000629058 1903 ntBASIC19.39■□□□□ 0.7
EFCC1Q9HA90 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
EFCC1Q9HA90 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFCC1Q9HA90 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EFCC1Q9HA90 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
EFCC1Q9HA90 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms