Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.14■□□□□ 0.49
HIPK3Q9H422 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 AC108860.2-201ENST00000562760 2183 ntBASIC18.14■□□□□ 0.49
HIPK3Q9H422 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HIPK3Q9H422 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HIPK3Q9H422 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.13■□□□□ 0.49
HIPK3Q9H422 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 AC112492.5-201ENST00000421897 457 ntBASIC18.12■□□□□ 0.49
HIPK3Q9H422 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 KRT17P8-201ENST00000540749 863 ntBASIC18.12■□□□□ 0.49
HIPK3Q9H422 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 RAB43P1-201ENST00000561790 589 ntBASIC18.12■□□□□ 0.49
HIPK3Q9H422 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.12■□□□□ 0.49
HIPK3Q9H422 AC004790.1-201ENST00000612686 536 ntBASIC18.12■□□□□ 0.49
HIPK3Q9H422 AC007431.3-201ENST00000623221 587 ntBASIC18.12■□□□□ 0.49
HIPK3Q9H422 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
HIPK3Q9H422 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HIPK3Q9H422 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms