Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CNTNAP3Q9BZ76 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 CETN4P-206ENST00000642099 2168 ntBASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 CALR4P-201ENST00000431943 946 ntBASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 CSF2RBP1-201ENST00000447905 391 ntBASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 FO681548.1-201ENST00000455617 1132 ntBASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CNTNAP3Q9BZ76 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 AC234644.1-201ENST00000406065 370 ntBASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 AL589739.1-201ENST00000607720 493 ntBASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.88■□□□□ 0.13
CNTNAP3Q9BZ76 AC018665.1-201ENST00000622927 1362 ntBASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 AP3S2-216ENST00000617003 1561 ntBASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CNTNAP3Q9BZ76 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms