Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRDL1Q9BU40 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 NUS1P1-201ENST00000446295 882 ntBASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 AC004817.3-201ENST00000602957 2129 ntBASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 AP005117.1-201ENST00000584346 1413 ntBASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 LINC00554-201ENST00000564841 3011 ntBASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 AC079776.2-201ENST00000641154 1609 ntBASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CHRDL1Q9BU40 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 SIGLEC16-201ENST00000599858 1437 ntBASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 AC073592.4-201ENST00000623827 446 ntBASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CHRDL1Q9BU40 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms