Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLF1Q9BQI6 TNRC18P3-201ENST00000441896 2691 ntBASIC19.39■□□□□ 0.7
SLF1Q9BQI6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.39■□□□□ 0.7
SLF1Q9BQI6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 AC124947.2-201ENST00000547118 1133 ntBASIC19.39■□□□□ 0.69
SLF1Q9BQI6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 AC092364.2-202ENST00000597012 1073 ntBASIC19.39■□□□□ 0.69
SLF1Q9BQI6 AC008267.7-201ENST00000624570 1194 ntBASIC19.39■□□□□ 0.69
SLF1Q9BQI6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.39■□□□□ 0.69
SLF1Q9BQI6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLF1Q9BQI6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.38■□□□□ 0.69
SLF1Q9BQI6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 AC069262.1-201ENST00000539058 672 ntBASIC19.38■□□□□ 0.69
SLF1Q9BQI6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 DUX4L27-201ENST00000554796 1261 ntBASIC19.38■□□□□ 0.69
SLF1Q9BQI6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLF1Q9BQI6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 BCRP1-201ENST00000444246 691 ntBASIC19.37■□□□□ 0.69
SLF1Q9BQI6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 SLC25A39P2-201ENST00000537614 270 ntBASIC19.37■□□□□ 0.69
SLF1Q9BQI6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 AC026150.2-201ENST00000564693 1156 ntBASIC19.37■□□□□ 0.69
SLF1Q9BQI6 AC051619.7-201ENST00000568314 623 ntBASIC19.37■□□□□ 0.69
SLF1Q9BQI6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 AC027307.2-201ENST00000591252 911 ntBASIC19.37■□□□□ 0.69
SLF1Q9BQI6 AL096865.1-201ENST00000606796 927 ntBASIC19.37■□□□□ 0.69
SLF1Q9BQI6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.37■□□□□ 0.69
SLF1Q9BQI6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms