Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 Z69720.1-201ENST00000601483 472 ntBASIC12.74□□□□□ -0.37
VGLL1Q99990 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.74□□□□□ -0.37
VGLL1Q99990 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.74□□□□□ -0.37
VGLL1Q99990 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.73□□□□□ -0.37
VGLL1Q99990 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VGLL1Q99990 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.73□□□□□ -0.37
VGLL1Q99990 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
VGLL1Q99990 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 KRT17P6-201ENST00000453795 1220 ntBASIC12.73□□□□□ -0.37
VGLL1Q99990 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
VGLL1Q99990 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
VGLL1Q99990 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VGLL1Q99990 BNIP3P18-201ENST00000593976 575 ntBASIC12.73□□□□□ -0.37
VGLL1Q99990 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 AL121956.5-201ENST00000625261 221 ntBASIC12.73□□□□□ -0.37
VGLL1Q99990 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.73□□□□□ -0.37
VGLL1Q99990 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 LINC00895-201ENST00000629028 1637 ntBASIC12.73□□□□□ -0.37
VGLL1Q99990 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 AC004817.3-201ENST00000602957 2129 ntBASIC12.73□□□□□ -0.37
VGLL1Q99990 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VGLL1Q99990 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
VGLL1Q99990 NSUN5P1-202ENST00000421140 1535 ntBASIC12.72□□□□□ -0.37
VGLL1Q99990 NSUN5P2-203ENST00000457352 1529 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms