Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL109936.8-201ENST00000641772 604 ntBASIC17.19■□□□□ 0.34
CDCA3Q99618 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDCA3Q99618 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDCA3Q99618 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDCA3Q99618 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA3Q99618 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA3Q99618 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDCA3Q99618 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA3Q99618 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDCA3Q99618 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCA3Q99618 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDCA3Q99618 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA3Q99618 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA3Q99618 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA3Q99618 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCA3Q99618 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.18■□□□□ 0.34
CDCA3Q99618 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA3Q99618 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CDCA3Q99618 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.18■□□□□ 0.34
CDCA3Q99618 AL033527.4-201ENST00000641026 673 ntBASIC17.18■□□□□ 0.34
CDCA3Q99618 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA3Q99618 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDCA3Q99618 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.18■□□□□ 0.34
CDCA3Q99618 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA3Q99618 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDCA3Q99618 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.18■□□□□ 0.34
CDCA3Q99618 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA3Q99618 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDCA3Q99618 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA3Q99618 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.17■□□□□ 0.34
CDCA3Q99618 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA3Q99618 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDCA3Q99618 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA3Q99618 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA3Q99618 TIMM17BP1-201ENST00000545713 516 ntBASIC17.17■□□□□ 0.34
CDCA3Q99618 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 AC074044.1-201ENST00000609673 707 ntBASIC17.17■□□□□ 0.34
CDCA3Q99618 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.17■□□□□ 0.34
CDCA3Q99618 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA3Q99618 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 NOC2LP1-202ENST00000452600 2235 ntBASIC17.17■□□□□ 0.34
CDCA3Q99618 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA3Q99618 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.17■□□□□ 0.34
CDCA3Q99618 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDCA3Q99618 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDCA3Q99618 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDCA3Q99618 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDCA3Q99618 AC135050.7-201ENST00000624508 2218 ntBASIC17.16■□□□□ 0.34
CDCA3Q99618 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDCA3Q99618 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
CDCA3Q99618 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms