Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
S1PR3Q99500 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
S1PR3Q99500 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
S1PR3Q99500 AL391256.1-201ENST00000443260 1855 ntBASIC13.84□□□□□ -0.19
S1PR3Q99500 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.84□□□□□ -0.19
S1PR3Q99500 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
S1PR3Q99500 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
S1PR3Q99500 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
S1PR3Q99500 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
S1PR3Q99500 AL645728.1-201ENST00000366221 2101 ntBASIC13.84□□□□□ -0.19
S1PR3Q99500 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
S1PR3Q99500 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
S1PR3Q99500 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.83□□□□□ -0.19
S1PR3Q99500 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
S1PR3Q99500 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.83□□□□□ -0.19
S1PR3Q99500 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
S1PR3Q99500 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 DOC2GP-204ENST00000639052 2548 ntBASIC13.83□□□□□ -0.2
S1PR3Q99500 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.83□□□□□ -0.2
S1PR3Q99500 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.83□□□□□ -0.2
S1PR3Q99500 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.83□□□□□ -0.2
S1PR3Q99500 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.83□□□□□ -0.2
S1PR3Q99500 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.83□□□□□ -0.2
S1PR3Q99500 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 AC006557.2-201ENST00000592985 1240 ntBASIC13.83□□□□□ -0.2
S1PR3Q99500 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.83□□□□□ -0.2
S1PR3Q99500 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
S1PR3Q99500 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
S1PR3Q99500 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
S1PR3Q99500 AC018695.7-201ENST00000624587 2492 ntBASIC13.83□□□□□ -0.2
S1PR3Q99500 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
S1PR3Q99500 LINC00895-201ENST00000629028 1637 ntBASIC13.82□□□□□ -0.2
S1PR3Q99500 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
S1PR3Q99500 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 HLA-A-202ENST00000376806 1854 ntBASIC13.82□□□□□ -0.2
S1PR3Q99500 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.82□□□□□ -0.2
S1PR3Q99500 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.82□□□□□ -0.2
S1PR3Q99500 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.82□□□□□ -0.2
S1PR3Q99500 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.82□□□□□ -0.2
S1PR3Q99500 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
S1PR3Q99500 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.82□□□□□ -0.2
S1PR3Q99500 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
S1PR3Q99500 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
S1PR3Q99500 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.82□□□□□ -0.2
S1PR3Q99500 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
S1PR3Q99500 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.82□□□□□ -0.2
S1PR3Q99500 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.82□□□□□ -0.2
S1PR3Q99500 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.82□□□□□ -0.2
S1PR3Q99500 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.82□□□□□ -0.2
S1PR3Q99500 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
S1PR3Q99500 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
S1PR3Q99500 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.82□□□□□ -0.2
S1PR3Q99500 AC073648.2-201ENST00000510116 352 ntBASIC13.82□□□□□ -0.2
S1PR3Q99500 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms