Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 AL137784.3-201ENST00000623858 2288 ntBASIC15.79■□□□□ 0.12
NR1H4Q96RI1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NR1H4Q96RI1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 AL158047.1-201ENST00000445918 881 ntBASIC15.78■□□□□ 0.12
NR1H4Q96RI1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 SLC25A1P4-201ENST00000567977 778 ntBASIC15.78■□□□□ 0.12
NR1H4Q96RI1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 ITM2C-210ENST00000620962 501 ntBASIC15.78■□□□□ 0.12
NR1H4Q96RI1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.78■□□□□ 0.12
NR1H4Q96RI1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 AL161772.1-201ENST00000610494 4412 ntBASIC15.77■□□□□ 0.12
NR1H4Q96RI1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NR1H4Q96RI1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NR1H4Q96RI1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms