Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 U1.21-201ENST00000580816 167 ntBASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 AC093726.1-201ENST00000608064 963 ntBASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.06□□□□□ -0.16
CSMD1Q96PZ7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 AC080080.1-201ENST00000625121 2420 ntBASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 CALR4P-201ENST00000431943 946 ntBASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 AL138781.2-201ENST00000617896 1843 ntBASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 CETN4P-206ENST00000642099 2168 ntBASIC14.05□□□□□ -0.16
CSMD1Q96PZ7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 AL355334.1-201ENST00000417713 215 ntBASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 AC009542.2-202ENST00000619004 1067 ntBASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 AL035456.1-201ENST00000456064 1369 ntBASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 AL079307.3-201ENST00000556114 283 ntBASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 ABALON-201ENST00000629058 1903 ntBASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSMD1Q96PZ7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 AL354751.1-201ENST00000412768 1863 ntBASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms