Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.72■□□□□ 0.43
CALR3Q96L12 AC091076.1-201ENST00000610741 619 ntBASIC17.72■□□□□ 0.43
CALR3Q96L12 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CALR3Q96L12 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.72■□□□□ 0.43
CALR3Q96L12 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CALR3Q96L12 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 LINC01144-201ENST00000626198 1710 ntBASIC17.72■□□□□ 0.43
CALR3Q96L12 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 AC024909.3-201ENST00000611513 2257 ntBASIC17.72■□□□□ 0.43
CALR3Q96L12 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CALR3Q96L12 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CALR3Q96L12 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CALR3Q96L12 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.71■□□□□ 0.43
CALR3Q96L12 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.71■□□□□ 0.43
CALR3Q96L12 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.71■□□□□ 0.43
CALR3Q96L12 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.71■□□□□ 0.43
CALR3Q96L12 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.71■□□□□ 0.43
CALR3Q96L12 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.71■□□□□ 0.43
CALR3Q96L12 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.71■□□□□ 0.43
CALR3Q96L12 KRT18P21-201ENST00000515767 1272 ntBASIC17.71■□□□□ 0.43
CALR3Q96L12 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.71■□□□□ 0.43
CALR3Q96L12 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.71■□□□□ 0.43
CALR3Q96L12 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.71■□□□□ 0.43
CALR3Q96L12 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CALR3Q96L12 NKAPP1-205ENST00000585790 367 ntBASIC17.71■□□□□ 0.43
CALR3Q96L12 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.71■□□□□ 0.43
CALR3Q96L12 REXO1L3P-201ENST00000622202 1288 ntBASIC17.71■□□□□ 0.43
CALR3Q96L12 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CALR3Q96L12 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.71■□□□□ 0.43
CALR3Q96L12 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.71■□□□□ 0.43
CALR3Q96L12 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CALR3Q96L12 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.71■□□□□ 0.42
CALR3Q96L12 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CALR3Q96L12 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.7■□□□□ 0.42
CALR3Q96L12 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.7■□□□□ 0.42
CALR3Q96L12 AL512652.2-201ENST00000625156 1716 ntBASIC17.7■□□□□ 0.42
CALR3Q96L12 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.7■□□□□ 0.42
CALR3Q96L12 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CALR3Q96L12 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 FAM210CP-201ENST00000445714 574 ntBASIC17.7■□□□□ 0.42
CALR3Q96L12 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.7■□□□□ 0.42
CALR3Q96L12 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.7■□□□□ 0.42
CALR3Q96L12 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.7■□□□□ 0.42
CALR3Q96L12 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CALR3Q96L12 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CALR3Q96L12 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CALR3Q96L12 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CALR3Q96L12 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 AC132872.4-202ENST00000622924 2756 ntBASIC17.69■□□□□ 0.42
CALR3Q96L12 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CALR3Q96L12 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CALR3Q96L12 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CALR3Q96L12 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms