Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 AC006504.4-201ENST00000592118 1568 ntBASIC17.28■□□□□ 0.36
IFT43Q96FT9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 ELK2BP-201ENST00000415014 1224 ntBASIC17.28■□□□□ 0.36
IFT43Q96FT9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IFT43Q96FT9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
IFT43Q96FT9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IFT43Q96FT9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 AGGF1P2-201ENST00000426656 2106 ntBASIC17.27■□□□□ 0.36
IFT43Q96FT9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFT43Q96FT9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFT43Q96FT9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFT43Q96FT9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFT43Q96FT9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.27■□□□□ 0.36
IFT43Q96FT9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IFT43Q96FT9 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 PTCHD3P3-201ENST00000403073 906 ntBASIC17.27■□□□□ 0.36
IFT43Q96FT9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 UPF3AP3-201ENST00000420996 769 ntBASIC17.27■□□□□ 0.36
IFT43Q96FT9 AC004832.2-201ENST00000426397 482 ntBASIC17.27■□□□□ 0.36
IFT43Q96FT9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IFT43Q96FT9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IFT43Q96FT9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.27■□□□□ 0.36
IFT43Q96FT9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IFT43Q96FT9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IFT43Q96FT9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
IFT43Q96FT9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IFT43Q96FT9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.27■□□□□ 0.35
IFT43Q96FT9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IFT43Q96FT9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
IFT43Q96FT9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IFT43Q96FT9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 PI4KAP1-204ENST00000612579 1703 ntBASIC17.26■□□□□ 0.35
IFT43Q96FT9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFT43Q96FT9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.26■□□□□ 0.35
IFT43Q96FT9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms