Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF31Q96EP0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 AL645939.2-201ENST00000427340 991 ntBASIC16.15■□□□□ 0.18
RNF31Q96EP0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 AC022145.2-201ENST00000598203 171 ntBASIC16.15■□□□□ 0.18
RNF31Q96EP0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RNF31Q96EP0 UBALD1-205ENST00000590891 2641 ntBASIC16.15■□□□□ 0.18
RNF31Q96EP0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF31Q96EP0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.14■□□□□ 0.18
RNF31Q96EP0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
RNF31Q96EP0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 PCDH8P1-201ENST00000428983 2773 ntBASIC16.14■□□□□ 0.17
RNF31Q96EP0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 AC093520.2-201ENST00000561830 333 ntBASIC16.14■□□□□ 0.17
RNF31Q96EP0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 AC099522.2-201ENST00000607001 744 ntBASIC16.14■□□□□ 0.17
RNF31Q96EP0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
RNF31Q96EP0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF31Q96EP0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF31Q96EP0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF31Q96EP0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF31Q96EP0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF31Q96EP0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF31Q96EP0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms