Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 AC020907.1-201ENST00000616460 1350 ntBASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 AC018665.1-201ENST00000622927 1362 ntBASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 TNXA-203ENST00000507684 2038 ntBASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 KRT43P-201ENST00000434019 910 ntBASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRIM43Q96BQ3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 AC116353.5-201ENST00000638148 1699 ntBASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 AC099336.1-201ENST00000417053 1171 ntBASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 AC024267.1-201ENST00000582320 895 ntBASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 AC244093.1-201ENST00000610837 814 ntBASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.9■□□□□ 0.46
TRIM43Q96BQ3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.89■□□□□ 0.46
TRIM43Q96BQ3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TRIM43Q96BQ3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM43Q96BQ3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM43Q96BQ3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM43Q96BQ3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AC093724.1-201ENST00000448659 1027 ntBASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AC233724.13-201ENST00000598383 410 ntBASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AC026979.3-201ENST00000607315 403 ntBASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 AC006277.1-201ENST00000624348 1610 ntBASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM43Q96BQ3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms