Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CNKSR1Q969H4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR1Q969H4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR1Q969H4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR1Q969H4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.24■□□□□ 0.83
CNKSR1Q969H4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR1Q969H4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNKSR1Q969H4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 AC098850.1-201ENST00000419919 790 ntBASIC20.23■□□□□ 0.83
CNKSR1Q969H4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 AL589987.1-201ENST00000453380 819 ntBASIC20.23■□□□□ 0.83
CNKSR1Q969H4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 AC061975.2-201ENST00000581722 295 ntBASIC20.23■□□□□ 0.83
CNKSR1Q969H4 MIR6775-201ENST00000617557 69 ntBASIC20.23■□□□□ 0.83
CNKSR1Q969H4 AL138688.1-201ENST00000624851 1594 ntBASIC20.23■□□□□ 0.83
CNKSR1Q969H4 AL109936.8-201ENST00000641772 604 ntBASIC20.23■□□□□ 0.83
CNKSR1Q969H4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 AC020763.4-201ENST00000623414 4170 ntBASIC20.23■□□□□ 0.83
CNKSR1Q969H4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.23■□□□□ 0.83
CNKSR1Q969H4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 AL354751.1-201ENST00000412768 1863 ntBASIC20.22■□□□□ 0.83
CNKSR1Q969H4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 AC093724.1-201ENST00000448659 1027 ntBASIC20.22■□□□□ 0.83
CNKSR1Q969H4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 RRP7BP-205ENST00000566851 833 ntBASIC20.22■□□□□ 0.83
CNKSR1Q969H4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 MIR4525-201ENST00000580000 75 ntBASIC20.22■□□□□ 0.83
CNKSR1Q969H4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 TMEM261P1-201ENST00000604899 340 ntBASIC20.22■□□□□ 0.83
CNKSR1Q969H4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CNKSR1Q969H4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 AC092552.1-201ENST00000547243 906 ntBASIC20.21■□□□□ 0.83
CNKSR1Q969H4 WFDC1-204ENST00000613603 549 ntBASIC20.21■□□□□ 0.83
CNKSR1Q969H4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNKSR1Q969H4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms