Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0A1Q93050 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP6V0A1Q93050 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0A1Q93050 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP6V0A1Q93050 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
ATP6V0A1Q93050 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0A1Q93050 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP6V0A1Q93050 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 RNA5SP421-201ENST00000516864 134 ntBASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 AC051619.7-201ENST00000568314 623 ntBASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 KRT8P39-201ENST00000396270 1433 ntBASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP6V0A1Q93050 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.64■□□□□ 0.58
ATP6V0A1Q93050 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
ATP6V0A1Q93050 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP6V0A1Q93050 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP6V0A1Q93050 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 AL645728.1-201ENST00000366221 2101 ntBASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP6V0A1Q93050 AL671710.1-201ENST00000610245 2349 ntBASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 AC016027.1-202ENST00000607927 1699 ntBASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 KLF2P3-201ENST00000451977 1087 ntBASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 AC026150.2-201ENST00000564693 1156 ntBASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 MIR4745-201ENST00000577608 62 ntBASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP6V0A1Q93050 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms