Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC25.48■■□□□ 1.67
CCNB3Q8WWL7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 CALY-202ENST00000368555 783 ntTSL 2 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CCNB3Q8WWL7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 AL353705.2-201ENST00000428243 662 ntBASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 TEX28P1-201ENST00000613479 1221 ntBASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 TEX28P2-201ENST00000617764 1221 ntBASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 KRT8P39-201ENST00000396270 1433 ntBASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 AL035456.1-201ENST00000456064 1369 ntBASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CCNB3Q8WWL7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 SPTLC1P1-201ENST00000447199 261 ntBASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 AL844908.2-201ENST00000609461 460 ntBASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 AC025048.6-201ENST00000634326 1161 ntBASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC25.45■■□□□ 1.67
CCNB3Q8WWL7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
CCNB3Q8WWL7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CCNB3Q8WWL7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCNB3Q8WWL7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCNB3Q8WWL7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCNB3Q8WWL7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCNB3Q8WWL7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC25.45■■□□□ 1.66
CCNB3Q8WWL7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 SPTSSB-204ENST00000617024 1292 ntBASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 AL512652.2-201ENST00000625156 1716 ntBASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCNB3Q8WWL7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms