Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 AC012313.1-201ENST00000593393 3059 ntBASIC16.7■□□□□ 0.26
HMGB4Q8WW32 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 AC108860.2-201ENST00000562760 2183 ntBASIC16.7■□□□□ 0.26
HMGB4Q8WW32 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGB4Q8WW32 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 HLA-H-201ENST00000383620 1096 ntBASIC16.69■□□□□ 0.26
HMGB4Q8WW32 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 AL358472.5-202ENST00000641448 1267 ntBASIC16.69■□□□□ 0.26
HMGB4Q8WW32 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGB4Q8WW32 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 AL353705.2-201ENST00000428243 662 ntBASIC16.68■□□□□ 0.26
HMGB4Q8WW32 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 AL662799.1-202ENST00000614205 422 ntBASIC16.68■□□□□ 0.26
HMGB4Q8WW32 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGB4Q8WW32 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGB4Q8WW32 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms