Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CFAP43Q8NDM7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 BCYRN1-201ENST00000418539 200 ntBASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC25.71■■□□□ 1.71
CFAP43Q8NDM7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
CFAP43Q8NDM7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CFAP43Q8NDM7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC25.7■■□□□ 1.71
CFAP43Q8NDM7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC25.7■■□□□ 1.71
CFAP43Q8NDM7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
CFAP43Q8NDM7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CFAP43Q8NDM7 GGT3P-204ENST00000453783 1664 ntBASIC25.7■■□□□ 1.71
CFAP43Q8NDM7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CFAP43Q8NDM7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CFAP43Q8NDM7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 AC007389.4-201ENST00000454674 793 ntBASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 RN7SL618P-201ENST00000477850 296 ntBASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CFAP43Q8NDM7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 AP001094.4-201ENST00000579008 2176 ntBASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 AC114501.2-201ENST00000439631 535 ntBASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 RNA5SP410-201ENST00000516285 106 ntBASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 AC061975.2-201ENST00000581722 295 ntBASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 AL109936.8-201ENST00000641772 604 ntBASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 AL391256.1-201ENST00000443260 1855 ntBASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CFAP43Q8NDM7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 OSM-203ENST00000403463 464 ntTSL 3 BASIC25.68■■□□□ 1.7
CFAP43Q8NDM7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms