Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CARMIL3Q8ND23 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 AC132938.2-201ENST00000579188 680 ntBASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 AL591163.1-201ENST00000641757 987 ntBASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CARMIL3Q8ND23 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CARMIL3Q8ND23 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 AC139713.2-201ENST00000641328 2723 ntBASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 AL391825.1-201ENST00000457671 1364 ntBASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 TUBB8P12-201ENST00000308911 1335 ntBASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 TUBB7P-202ENST00000428444 1305 ntBASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 TUBB8P7-204ENST00000567960 1332 ntBASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CARMIL3Q8ND23 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 ACA64.2-201ENST00000459014 129 ntBASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 AC124947.2-201ENST00000547118 1133 ntBASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 AL512361.1-201ENST00000554200 418 ntBASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 AC013467.2-201ENST00000605472 835 ntBASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CARMIL3Q8ND23 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms