Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEFF1Q8IYR6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 FOXO1B-201ENST00000504678 1527 ntBASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 HLA-H-201ENST00000383620 1096 ntBASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 SLC25A1P3-201ENST00000395415 828 ntBASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 AC009407.1-201ENST00000568958 598 ntBASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 MIR4492-201ENST00000581627 80 ntBASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 AC008738.7-201ENST00000609744 511 ntBASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
TMEFF1Q8IYR6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 AC007541.1-201ENST00000570282 1469 ntBASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 CU639417.3-201ENST00000624240 1404 ntBASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEFF1Q8IYR6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 FRMD8P1-201ENST00000440433 1524 ntBASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 AL353705.2-201ENST00000428243 662 ntBASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 AC009477.1-201ENST00000452936 217 ntBASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 AL589739.1-201ENST00000607720 493 ntBASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 TEX28P1-201ENST00000613479 1221 ntBASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 TEX28P2-201ENST00000617764 1221 ntBASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 AL035456.1-201ENST00000456064 1369 ntBASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEFF1Q8IYR6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms