Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM42Q8IWZ5 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 AL353801.3-201ENST00000609898 542 ntBASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 AL121956.5-201ENST00000625261 221 ntBASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 AL596087.1-201ENST00000400979 1969 ntBASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 AC104640.1-201ENST00000562617 2109 ntBASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM42Q8IWZ5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 DUX4L17-201ENST00000557360 1267 ntBASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 RNF126P1-202ENST00000569893 925 ntBASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 HYMAI.1-201ENST00000620949 238 ntBASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM42Q8IWZ5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms