Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
NPAS4Q8IUM7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.77■□□□□ 0.43
NPAS4Q8IUM7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 AL139011.1-202ENST00000642063 584 ntBASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS4Q8IUM7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 AC098614.1-201ENST00000368528 745 ntBASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 DFFBP1-201ENST00000433250 979 ntBASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 AC024267.1-201ENST00000582320 895 ntBASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 PCDHB17P-201ENST00000539533 2393 ntBASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.75■□□□□ 0.43
NPAS4Q8IUM7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 NOC2LP2-201ENST00000407594 1944 ntBASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 AC093724.1-201ENST00000448659 1027 ntBASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 AP002490.2-201ENST00000524791 560 ntBASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 AC104794.3-201ENST00000566840 1248 ntBASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 AC138969.3-201ENST00000546612 1459 ntBASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 AC138932.2-201ENST00000548268 1459 ntBASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 AC126755.4-201ENST00000549796 1459 ntBASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS4Q8IUM7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NPAS4Q8IUM7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms