Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 PCDHA1-201ENST00000378133 2726 ntBASIC15.48■□□□□ 0.07
VRK2Q86Y07 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VRK2Q86Y07 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.48■□□□□ 0.07
VRK2Q86Y07 GGT3P-204ENST00000453783 1664 ntBASIC15.48■□□□□ 0.07
VRK2Q86Y07 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 AC091167.2-201ENST00000579581 588 ntBASIC15.47■□□□□ 0.07
VRK2Q86Y07 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VRK2Q86Y07 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 AL031731.1-201ENST00000642131 2094 ntBASIC15.47■□□□□ 0.07
VRK2Q86Y07 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VRK2Q86Y07 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 KRT8P39-201ENST00000396270 1433 ntBASIC15.46■□□□□ 0.07
VRK2Q86Y07 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 DUSP5P1-201ENST00000441325 1139 ntBASIC15.46■□□□□ 0.07
VRK2Q86Y07 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 AC012640.2-201ENST00000561606 901 ntBASIC15.46■□□□□ 0.07
VRK2Q86Y07 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 AL121912.1-201ENST00000603683 238 ntBASIC15.46■□□□□ 0.07
VRK2Q86Y07 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 GGTLC5P-201ENST00000617623 998 ntBASIC15.46■□□□□ 0.07
VRK2Q86Y07 AC008735.5-201ENST00000623544 497 ntBASIC15.46■□□□□ 0.07
VRK2Q86Y07 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
VRK2Q86Y07 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
VRK2Q86Y07 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms