Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.87■□□□□ 0.29
RAPH1Q70E73 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.87■□□□□ 0.29
RAPH1Q70E73 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAPH1Q70E73 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.87■□□□□ 0.29
RAPH1Q70E73 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.87■□□□□ 0.29
RAPH1Q70E73 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.87■□□□□ 0.29
RAPH1Q70E73 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 AC010331.1-201ENST00000611423 582 ntBASIC16.87■□□□□ 0.29
RAPH1Q70E73 AL358472.4-201ENST00000633140 710 ntBASIC16.87■□□□□ 0.29
RAPH1Q70E73 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.87■□□□□ 0.29
RAPH1Q70E73 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.87■□□□□ 0.29
RAPH1Q70E73 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAPH1Q70E73 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 AC138894.3-201ENST00000603787 634 ntBASIC16.86■□□□□ 0.29
RAPH1Q70E73 NPAP1P7-201ENST00000613027 823 ntBASIC16.86■□□□□ 0.29
RAPH1Q70E73 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 ALOX12P2-203ENST00000570921 1945 ntBASIC16.86■□□□□ 0.29
RAPH1Q70E73 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.86■□□□□ 0.29
RAPH1Q70E73 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAPH1Q70E73 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 CYP2T1P-202ENST00000641596 2535 ntBASIC16.85■□□□□ 0.29
RAPH1Q70E73 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 AP002414.1-201ENST00000391405 1147 ntBASIC16.85■□□□□ 0.29
RAPH1Q70E73 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.85■□□□□ 0.29
RAPH1Q70E73 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 AC073592.4-201ENST00000623827 446 ntBASIC16.85■□□□□ 0.29
RAPH1Q70E73 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAPH1Q70E73 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAPH1Q70E73 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms