Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF20Q5VTR2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 ME2P1-201ENST00000426028 1970 ntBASIC19.96■□□□□ 0.79
RNF20Q5VTR2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 GGT3P-204ENST00000453783 1664 ntBASIC19.96■□□□□ 0.79
RNF20Q5VTR2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 AC012569.1-201ENST00000591191 1524 ntBASIC19.96■□□□□ 0.79
RNF20Q5VTR2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 ALOX12P2-203ENST00000570921 1945 ntBASIC19.96■□□□□ 0.79
RNF20Q5VTR2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF20Q5VTR2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 CXCL1P1-201ENST00000502804 216 ntBASIC19.95■□□□□ 0.78
RNF20Q5VTR2 UNC93B6-202ENST00000528242 690 ntBASIC19.95■□□□□ 0.78
RNF20Q5VTR2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF20Q5VTR2 AL031731.1-201ENST00000642131 2094 ntBASIC19.95■□□□□ 0.78
RNF20Q5VTR2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 AC079328.2-201ENST00000561241 3354 ntBASIC19.94■□□□□ 0.78
RNF20Q5VTR2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF20Q5VTR2 AC009078.2-202ENST00000463353 338 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms