Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 UPF3AP2-201ENST00000457924 1132 ntBASIC14.29□□□□□ -0.12
LRRK2Q5S007 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 EGFEM1P-202ENST00000431685 1563 ntBASIC14.29□□□□□ -0.12
LRRK2Q5S007 CLK3P2-201ENST00000427566 1453 ntBASIC14.29□□□□□ -0.12
LRRK2Q5S007 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 AC036164.1-201ENST00000570544 333 ntBASIC14.29□□□□□ -0.12
LRRK2Q5S007 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 AC008687.7-202ENST00000637404 953 ntBASIC14.29□□□□□ -0.12
LRRK2Q5S007 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 PTP4A1P2-201ENST00000546033 454 ntBASIC14.28□□□□□ -0.12
LRRK2Q5S007 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 MIR326-201ENST00000362220 95 ntBASIC14.28□□□□□ -0.12
LRRK2Q5S007 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRRK2Q5S007 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 AL355864.2-201ENST00000447420 863 ntBASIC14.28□□□□□ -0.12
LRRK2Q5S007 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.28□□□□□ -0.12
LRRK2Q5S007 MIR6069-201ENST00000620069 79 ntBASIC14.28□□□□□ -0.12
LRRK2Q5S007 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.27□□□□□ -0.12
LRRK2Q5S007 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRK2Q5S007 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRK2Q5S007 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.27□□□□□ -0.12
LRRK2Q5S007 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRK2Q5S007 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.27□□□□□ -0.12
LRRK2Q5S007 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRK2Q5S007 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRK2Q5S007 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRK2Q5S007 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LRRK2Q5S007 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRRK2Q5S007 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRRK2Q5S007 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.27□□□□□ -0.12
LRRK2Q5S007 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.27□□□□□ -0.12
LRRK2Q5S007 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LRRK2Q5S007 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRK2Q5S007 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LRRK2Q5S007 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRK2Q5S007 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRK2Q5S007 LYSMD4-203ENST00000378904 2122 ntBASIC14.27□□□□□ -0.13
LRRK2Q5S007 BX284668.4-201ENST00000453917 508 ntBASIC14.27□□□□□ -0.13
LRRK2Q5S007 RN7SL720P-201ENST00000488178 304 ntBASIC14.27□□□□□ -0.13
LRRK2Q5S007 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.27□□□□□ -0.13
LRRK2Q5S007 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.27□□□□□ -0.13
LRRK2Q5S007 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRK2Q5S007 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRK2Q5S007 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LRRK2Q5S007 AL671710.1-201ENST00000610245 2349 ntBASIC14.27□□□□□ -0.13
LRRK2Q5S007 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRK2Q5S007 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.27□□□□□ -0.13
LRRK2Q5S007 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.27□□□□□ -0.13
LRRK2Q5S007 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms