Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
KCNA1Q09470 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
KCNA1Q09470 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNA1Q09470 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
KCNA1Q09470 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNA1Q09470 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNA1Q09470 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
KCNA1Q09470 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNA1Q09470 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.34■□□□□ 0.53
KCNA1Q09470 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNA1Q09470 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KCNA1Q09470 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNA1Q09470 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.34■□□□□ 0.53
KCNA1Q09470 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNA1Q09470 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KCNA1Q09470 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
KCNA1Q09470 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
KCNA1Q09470 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
KCNA1Q09470 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KCNA1Q09470 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNA1Q09470 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
KCNA1Q09470 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
KCNA1Q09470 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA1Q09470 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.33■□□□□ 0.53
KCNA1Q09470 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.33■□□□□ 0.53
KCNA1Q09470 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA1Q09470 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA1Q09470 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
KCNA1Q09470 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA1Q09470 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KCNA1Q09470 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.33■□□□□ 0.53
KCNA1Q09470 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
KCNA1Q09470 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA1Q09470 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
KCNA1Q09470 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA1Q09470 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.33■□□□□ 0.52
KCNA1Q09470 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
KCNA1Q09470 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
KCNA1Q09470 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.33■□□□□ 0.52
KCNA1Q09470 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.33■□□□□ 0.52
KCNA1Q09470 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA1Q09470 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA1Q09470 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA1Q09470 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA1Q09470 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
KCNA1Q09470 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA1Q09470 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.33■□□□□ 0.52
KCNA1Q09470 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
KCNA1Q09470 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KCNA1Q09470 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
KCNA1Q09470 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.33■□□□□ 0.52
KCNA1Q09470 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA1Q09470 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KCNA1Q09470 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.32■□□□□ 0.52
KCNA1Q09470 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA1Q09470 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.32■□□□□ 0.52
KCNA1Q09470 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
KCNA1Q09470 AC074386.1-202ENST00000463561 864 ntBASIC18.32■□□□□ 0.52
KCNA1Q09470 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA1Q09470 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA1Q09470 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.32■□□□□ 0.52
KCNA1Q09470 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.32■□□□□ 0.52
KCNA1Q09470 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KCNA1Q09470 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.32■□□□□ 0.52
KCNA1Q09470 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 AL031055.1-201ENST00000606362 631 ntBASIC18.32■□□□□ 0.52
KCNA1Q09470 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.32■□□□□ 0.52
KCNA1Q09470 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
KCNA1Q09470 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA1Q09470 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KCNA1Q09470 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.32■□□□□ 0.52
KCNA1Q09470 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.32■□□□□ 0.52
KCNA1Q09470 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KCNA1Q09470 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KCNA1Q09470 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms