Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH1Q08174 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH1Q08174 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH1Q08174 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDH1Q08174 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDH1Q08174 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDH1Q08174 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDH1Q08174 MIR4515-201ENST00000584082 81 ntBASIC16.13■□□□□ 0.17
PCDH1Q08174 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDH1Q08174 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 AL031731.1-201ENST00000642131 2094 ntBASIC16.13■□□□□ 0.17
PCDH1Q08174 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
PCDH1Q08174 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDH1Q08174 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 CYP2T1P-202ENST00000641596 2535 ntBASIC16.13■□□□□ 0.17
PCDH1Q08174 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.13■□□□□ 0.17
PCDH1Q08174 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDH1Q08174 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDH1Q08174 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDH1Q08174 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PCDH1Q08174 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PCDH1Q08174 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH1Q08174 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH1Q08174 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH1Q08174 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 PCDHB19P-201ENST00000570871 2371 ntBASIC16.12■□□□□ 0.17
PCDH1Q08174 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 AC098831.1-202ENST00000438821 336 ntBASIC16.12■□□□□ 0.17
PCDH1Q08174 AC009947.1-201ENST00000444350 727 ntBASIC16.12■□□□□ 0.17
PCDH1Q08174 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH1Q08174 AC092910.1-201ENST00000482027 1129 ntBASIC16.12■□□□□ 0.17
PCDH1Q08174 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH1Q08174 AP001005.1-201ENST00000571755 1248 ntBASIC16.12■□□□□ 0.17
PCDH1Q08174 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.12■□□□□ 0.17
PCDH1Q08174 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PCDH1Q08174 MIR3909-201ENST00000579518 119 ntBASIC16.12■□□□□ 0.17
PCDH1Q08174 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
PCDH1Q08174 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.12■□□□□ 0.17
PCDH1Q08174 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH1Q08174 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH1Q08174 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.12■□□□□ 0.17
PCDH1Q08174 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 HLA-A-201ENST00000376802 1334 ntBASIC16.12■□□□□ 0.17
PCDH1Q08174 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PCDH1Q08174 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH1Q08174 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDH1Q08174 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDH1Q08174 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDH1Q08174 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH1Q08174 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH1Q08174 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH1Q08174 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDH1Q08174 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH1Q08174 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH1Q08174 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH1Q08174 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH1Q08174 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDH1Q08174 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH1Q08174 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDH1Q08174 AC006449.5-201ENST00000610658 2098 ntBASIC16.11■□□□□ 0.17
PCDH1Q08174 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH1Q08174 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
PCDH1Q08174 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH1Q08174 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDH1Q08174 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDH1Q08174 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDH1Q08174 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms