Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H3AP68431 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST1H3AP68431 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H3AP68431 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
HIST1H3AP68431 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HIST1H3AP68431 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST1H3AP68431 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.61□□□□□ -0.07
HIST1H3AP68431 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 CXCL1P1-201ENST00000502804 216 ntBASIC14.61□□□□□ -0.07
HIST1H3AP68431 AC093909.1-201ENST00000504731 1122 ntBASIC14.61□□□□□ -0.07
HIST1H3AP68431 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 MIR4515-201ENST00000584082 81 ntBASIC14.61□□□□□ -0.07
HIST1H3AP68431 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
HIST1H3AP68431 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 AC012569.1-201ENST00000591191 1524 ntBASIC14.61□□□□□ -0.07
HIST1H3AP68431 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HIST1H3AP68431 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 AC046158.3-201ENST00000624947 2558 ntBASIC14.6□□□□□ -0.07
HIST1H3AP68431 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.6□□□□□ -0.07
HIST1H3AP68431 VN2R19P-201ENST00000442399 1052 ntBASIC14.6□□□□□ -0.07
HIST1H3AP68431 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 AC009078.2-202ENST00000463353 338 ntBASIC14.6□□□□□ -0.07
HIST1H3AP68431 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.6□□□□□ -0.07
HIST1H3AP68431 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HIST1H3AP68431 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.59□□□□□ -0.07
HIST1H3AP68431 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
HIST1H3AP68431 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
HIST1H3AP68431 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms