Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP4BP1P59074 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 PAWRP1-201ENST00000451083 565 ntBASIC19.13■□□□□ 0.65
CHMP4BP1P59074 SLC25A6P2-201ENST00000497974 877 ntBASIC19.13■□□□□ 0.65
CHMP4BP1P59074 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 ACTL9-202ENST00000612068 1252 ntBASIC19.13■□□□□ 0.65
CHMP4BP1P59074 AL139327.4-201ENST00000612362 153 ntBASIC19.13■□□□□ 0.65
CHMP4BP1P59074 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 AC093512.1-201ENST00000617969 520 ntBASIC19.13■□□□□ 0.65
CHMP4BP1P59074 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.13■□□□□ 0.65
CHMP4BP1P59074 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 NFIC-211ENST00000641145 8399 ntBASIC19.13■□□□□ 0.65
CHMP4BP1P59074 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 AC105020.1-201ENST00000435356 2205 ntBASIC19.13■□□□□ 0.65
CHMP4BP1P59074 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CHMP4BP1P59074 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 AC087163.2-201ENST00000457299 853 ntBASIC19.12■□□□□ 0.65
CHMP4BP1P59074 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP4BP1P59074 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 AC112191.1-201ENST00000523689 701 ntBASIC19.11■□□□□ 0.65
CHMP4BP1P59074 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 AC011467.4-201ENST00000594891 528 ntBASIC19.11■□□□□ 0.65
CHMP4BP1P59074 AC092364.2-202ENST00000597012 1073 ntBASIC19.11■□□□□ 0.65
CHMP4BP1P59074 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 AC105339.1-204ENST00000636249 355 ntBASIC19.11■□□□□ 0.65
CHMP4BP1P59074 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHMP4BP1P59074 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms