Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCN4P51793 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCN4P51793 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.48■□□□□ 0.39
CLCN4P51793 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCN4P51793 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN4P51793 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN4P51793 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCN4P51793 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLCN4P51793 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLCN4P51793 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.48■□□□□ 0.39
CLCN4P51793 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.48■□□□□ 0.39
CLCN4P51793 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN4P51793 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN4P51793 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN4P51793 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLCN4P51793 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CLCN4P51793 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLCN4P51793 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLCN4P51793 AC087499.5-201ENST00000452760 1342 ntBASIC17.47■□□□□ 0.39
CLCN4P51793 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLCN4P51793 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLCN4P51793 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.47■□□□□ 0.39
CLCN4P51793 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.47■□□□□ 0.39
CLCN4P51793 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.47■□□□□ 0.39
CLCN4P51793 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CLCN4P51793 MEIS3P1-201ENST00000495167 958 ntBASIC17.47■□□□□ 0.39
CLCN4P51793 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.47■□□□□ 0.39
CLCN4P51793 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN4P51793 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.47■□□□□ 0.39
CLCN4P51793 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN4P51793 RN7SL828P-201ENST00000607615 303 ntBASIC17.47■□□□□ 0.39
CLCN4P51793 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CLCN4P51793 AL645608.8-201ENST00000606034 2086 ntBASIC17.47■□□□□ 0.39
CLCN4P51793 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.47■□□□□ 0.39
CLCN4P51793 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN4P51793 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.47■□□□□ 0.39
CLCN4P51793 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLCN4P51793 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLCN4P51793 CETN4P-206ENST00000642099 2168 ntBASIC17.46■□□□□ 0.39
CLCN4P51793 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN4P51793 AC141586.5-201ENST00000624546 2050 ntBASIC17.46■□□□□ 0.39
CLCN4P51793 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.46■□□□□ 0.39
CLCN4P51793 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN4P51793 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN4P51793 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN4P51793 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN4P51793 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CLCN4P51793 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN4P51793 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CLCN4P51793 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CLCN4P51793 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCN4P51793 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCN4P51793 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCN4P51793 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCN4P51793 RPL37AP1-201ENST00000412502 279 ntBASIC17.46■□□□□ 0.39
CLCN4P51793 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN4P51793 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN4P51793 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN4P51793 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN4P51793 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN4P51793 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLCN4P51793 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCN4P51793 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN4P51793 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.46■□□□□ 0.39
CLCN4P51793 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.46■□□□□ 0.39
CLCN4P51793 AC124947.2-201ENST00000547118 1133 ntBASIC17.46■□□□□ 0.39
CLCN4P51793 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms