Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC073648.2-201ENST00000510116 352 ntBASIC17.51■□□□□ 0.39
SLC1A1P43005 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SLC1A1P43005 AC008667.4-201ENST00000607370 168 ntBASIC17.51■□□□□ 0.39
SLC1A1P43005 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC1A1P43005 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 AC046158.3-201ENST00000624947 2558 ntBASIC17.51■□□□□ 0.39
SLC1A1P43005 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC1A1P43005 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC1A1P43005 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A1P43005 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A1P43005 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC1A1P43005 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC1A1P43005 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC1A1P43005 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC1A1P43005 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 PCGF3-213ENST00000620529 1899 ntBASIC17.5■□□□□ 0.39
SLC1A1P43005 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A1P43005 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A1P43005 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLC1A1P43005 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A1P43005 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC1A1P43005 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
SLC1A1P43005 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A1P43005 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A1P43005 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SLC1A1P43005 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC1A1P43005 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A1P43005 RPS2P1-201ENST00000434010 821 ntBASIC17.49■□□□□ 0.39
SLC1A1P43005 IGHV3-65-201ENST00000523210 341 ntBASIC17.49■□□□□ 0.39
SLC1A1P43005 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A1P43005 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC1A1P43005 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A1P43005 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A1P43005 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A1P43005 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A1P43005 IFNL4P1-201ENST00000607083 540 ntBASIC17.49■□□□□ 0.39
SLC1A1P43005 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A1P43005 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A1P43005 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 AL596087.1-201ENST00000400979 1969 ntBASIC17.49■□□□□ 0.39
SLC1A1P43005 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC1A1P43005 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC1A1P43005 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A1P43005 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
SLC1A1P43005 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC1A1P43005 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A1P43005 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms