Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MPDU1-223ENST00000582151 728 ntBASIC17.44■□□□□ 0.38
MTHFRP42898 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.44■□□□□ 0.38
MTHFRP42898 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MTHFRP42898 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MTHFRP42898 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTHFRP42898 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.44■□□□□ 0.38
MTHFRP42898 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MTHFRP42898 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MTHFRP42898 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.44■□□□□ 0.38
MTHFRP42898 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
MTHFRP42898 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
MTHFRP42898 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTHFRP42898 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
MTHFRP42898 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTHFRP42898 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTHFRP42898 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.44■□□□□ 0.38
MTHFRP42898 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MTHFRP42898 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MTHFRP42898 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MTHFRP42898 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.43■□□□□ 0.38
MTHFRP42898 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.43■□□□□ 0.38
MTHFRP42898 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
MTHFRP42898 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 AC098614.1-201ENST00000368528 745 ntBASIC17.43■□□□□ 0.38
MTHFRP42898 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MTHFRP42898 HLA-H-201ENST00000383620 1096 ntBASIC17.43■□□□□ 0.38
MTHFRP42898 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.43■□□□□ 0.38
MTHFRP42898 AL353705.2-201ENST00000428243 662 ntBASIC17.43■□□□□ 0.38
MTHFRP42898 AL353779.1-201ENST00000434793 351 ntBASIC17.43■□□□□ 0.38
MTHFRP42898 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.43■□□□□ 0.38
MTHFRP42898 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.43■□□□□ 0.38
MTHFRP42898 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.43■□□□□ 0.38
MTHFRP42898 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MTHFRP42898 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
MTHFRP42898 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 AC087499.5-201ENST00000452760 1342 ntBASIC17.43■□□□□ 0.38
MTHFRP42898 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MTHFRP42898 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
MTHFRP42898 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.42■□□□□ 0.38
MTHFRP42898 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.42■□□□□ 0.38
MTHFRP42898 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.42■□□□□ 0.38
MTHFRP42898 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
MTHFRP42898 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 SLC25A6P5-201ENST00000435663 894 ntBASIC17.42■□□□□ 0.38
MTHFRP42898 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.42■□□□□ 0.38
MTHFRP42898 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.42■□□□□ 0.38
MTHFRP42898 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.42■□□□□ 0.38
MTHFRP42898 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.42■□□□□ 0.38
MTHFRP42898 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.42■□□□□ 0.38
MTHFRP42898 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 AC140912.1-201ENST00000577171 1054 ntBASIC17.42■□□□□ 0.38
MTHFRP42898 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.42■□□□□ 0.38
MTHFRP42898 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.42■□□□□ 0.38
MTHFRP42898 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MTHFRP42898 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.42■□□□□ 0.38
MTHFRP42898 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.42■□□□□ 0.38
MTHFRP42898 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MTHFRP42898 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.42■□□□□ 0.38
MTHFRP42898 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MTHFRP42898 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.41■□□□□ 0.38
MTHFRP42898 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MTHFRP42898 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
MTHFRP42898 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.41■□□□□ 0.38
MTHFRP42898 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MTHFRP42898 EGFEM1P-202ENST00000431685 1563 ntBASIC17.41■□□□□ 0.38
MTHFRP42898 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms