Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 AP000523.1-201ENST00000398242 1049 ntBASIC12.35□□□□□ -0.43
CKS2P33552 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.35□□□□□ -0.43
CKS2P33552 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.35□□□□□ -0.43
CKS2P33552 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.35□□□□□ -0.43
CKS2P33552 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.35□□□□□ -0.43
CKS2P33552 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.35□□□□□ -0.43
CKS2P33552 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.35□□□□□ -0.43
CKS2P33552 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.35□□□□□ -0.43
CKS2P33552 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.35□□□□□ -0.43
CKS2P33552 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CKS2P33552 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.35□□□□□ -0.43
CKS2P33552 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.35□□□□□ -0.43
CKS2P33552 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CKS2P33552 AC010460.3-201ENST00000511359 1579 ntBASIC12.35□□□□□ -0.43
CKS2P33552 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 AL603832.2-201ENST00000566195 2125 ntBASIC12.34□□□□□ -0.43
CKS2P33552 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 AC010491.1-201ENST00000563101 2797 ntBASIC12.34□□□□□ -0.43
CKS2P33552 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 ABHD17AP1-201ENST00000358206 933 ntBASIC12.34□□□□□ -0.43
CKS2P33552 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 AC034232.1-201ENST00000506026 1064 ntBASIC12.34□□□□□ -0.43
CKS2P33552 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.34□□□□□ -0.43
CKS2P33552 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.34□□□□□ -0.43
CKS2P33552 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.34□□□□□ -0.43
CKS2P33552 KRT18P6-201ENST00000555540 1265 ntBASIC12.34□□□□□ -0.43
CKS2P33552 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.34□□□□□ -0.43
CKS2P33552 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.34□□□□□ -0.43
CKS2P33552 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.34□□□□□ -0.43
CKS2P33552 AC019129.2-201ENST00000609837 1235 ntBASIC12.34□□□□□ -0.43
CKS2P33552 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.34□□□□□ -0.43
CKS2P33552 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 AC073347.1-201ENST00000421633 2643 ntBASIC12.34□□□□□ -0.43
CKS2P33552 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CKS2P33552 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CKS2P33552 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms