Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CTPS1P17812 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.79■□□□□ 0.28
CTPS1P17812 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.79■□□□□ 0.28
CTPS1P17812 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CTPS1P17812 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CTPS1P17812 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CTPS1P17812 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CTPS1P17812 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.79■□□□□ 0.28
CTPS1P17812 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.79■□□□□ 0.28
CTPS1P17812 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CTPS1P17812 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.79■□□□□ 0.28
CTPS1P17812 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.79■□□□□ 0.28
CTPS1P17812 AC112482.1-201ENST00000492080 688 ntBASIC16.79■□□□□ 0.28
CTPS1P17812 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.79■□□□□ 0.28
CTPS1P17812 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.79■□□□□ 0.28
CTPS1P17812 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.79■□□□□ 0.28
CTPS1P17812 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.79■□□□□ 0.28
CTPS1P17812 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CTPS1P17812 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.79■□□□□ 0.28
CTPS1P17812 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.79■□□□□ 0.28
CTPS1P17812 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CTPS1P17812 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.79■□□□□ 0.28
CTPS1P17812 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTPS1P17812 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS1P17812 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CTPS1P17812 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
CTPS1P17812 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 KRT18P13-201ENST00000400056 1290 ntBASIC16.78■□□□□ 0.28
CTPS1P17812 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS1P17812 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.78■□□□□ 0.28
CTPS1P17812 GPX1P2-201ENST00000429271 606 ntBASIC16.78■□□□□ 0.28
CTPS1P17812 DNAJB3-201ENST00000446806 729 ntBASIC16.78■□□□□ 0.28
CTPS1P17812 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.78■□□□□ 0.28
CTPS1P17812 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.78■□□□□ 0.28
CTPS1P17812 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.78■□□□□ 0.28
CTPS1P17812 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTPS1P17812 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
CTPS1P17812 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.78■□□□□ 0.28
CTPS1P17812 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 AL009183.1-201ENST00000603760 355 ntBASIC16.78■□□□□ 0.28
CTPS1P17812 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.78■□□□□ 0.28
CTPS1P17812 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CTPS1P17812 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CTPS1P17812 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CTPS1P17812 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.78■□□□□ 0.28
CTPS1P17812 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 KRT8P39-201ENST00000396270 1433 ntBASIC16.78■□□□□ 0.28
CTPS1P17812 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CTPS1P17812 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTPS1P17812 HLA-A-202ENST00000376806 1854 ntBASIC16.78■□□□□ 0.28
CTPS1P17812 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.78■□□□□ 0.28
CTPS1P17812 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
CTPS1P17812 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.77■□□□□ 0.28
CTPS1P17812 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTPS1P17812 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CTPS1P17812 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.77■□□□□ 0.28
CTPS1P17812 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.77■□□□□ 0.28
CTPS1P17812 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 RPSAP43-201ENST00000402237 625 ntBASIC16.77■□□□□ 0.28
CTPS1P17812 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.77■□□□□ 0.28
CTPS1P17812 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.77■□□□□ 0.28
CTPS1P17812 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTPS1P17812 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms