Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL3L1P16619 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.8□□□□□ -0.2
CCL3L1P16619 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL3L1P16619 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL3L1P16619 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL3L1P16619 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CCL3L1P16619 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL3L1P16619 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 AL031432.2-201ENST00000566714 459 ntBASIC13.8□□□□□ -0.2
CCL3L1P16619 AL928711.1-201ENST00000570165 459 ntBASIC13.8□□□□□ -0.2
CCL3L1P16619 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL3L1P16619 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL3L1P16619 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.8□□□□□ -0.2
CCL3L1P16619 AL645728.2-201ENST00000641974 660 ntBASIC13.8□□□□□ -0.2
CCL3L1P16619 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CCL3L1P16619 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.8□□□□□ -0.2
CCL3L1P16619 AC084018.2-201ENST00000613093 2607 ntBASIC13.8□□□□□ -0.2
CCL3L1P16619 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 PCDHA14-201ENST00000506751 2298 ntBASIC13.8□□□□□ -0.2
CCL3L1P16619 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CCL3L1P16619 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.8□□□□□ -0.2
CCL3L1P16619 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CCL3L1P16619 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CCL3L1P16619 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL3L1P16619 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL3L1P16619 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 PGAM5P1-201ENST00000518923 814 ntBASIC13.79□□□□□ -0.2
CCL3L1P16619 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.79□□□□□ -0.2
CCL3L1P16619 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.79□□□□□ -0.2
CCL3L1P16619 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 PMS2P7-201ENST00000506558 1336 ntBASIC13.79□□□□□ -0.2
CCL3L1P16619 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CCL3L1P16619 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CCL3L1P16619 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.79□□□□□ -0.2
CCL3L1P16619 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CCL3L1P16619 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.79□□□□□ -0.2
CCL3L1P16619 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms