Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL11A1P12107 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.72■□□□□ 0.59
COL11A1P12107 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.72■□□□□ 0.59
COL11A1P12107 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.72■□□□□ 0.59
COL11A1P12107 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL11A1P12107 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
COL11A1P12107 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL11A1P12107 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.71■□□□□ 0.59
COL11A1P12107 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL11A1P12107 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.71■□□□□ 0.59
COL11A1P12107 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL11A1P12107 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL11A1P12107 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.71■□□□□ 0.59
COL11A1P12107 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.71■□□□□ 0.59
COL11A1P12107 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.71■□□□□ 0.59
COL11A1P12107 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.71■□□□□ 0.59
COL11A1P12107 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.71■□□□□ 0.59
COL11A1P12107 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.71■□□□□ 0.59
COL11A1P12107 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.71■□□□□ 0.59
COL11A1P12107 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.71■□□□□ 0.59
COL11A1P12107 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
COL11A1P12107 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.71■□□□□ 0.59
COL11A1P12107 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.71■□□□□ 0.59
COL11A1P12107 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL11A1P12107 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL11A1P12107 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.71■□□□□ 0.59
COL11A1P12107 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.71■□□□□ 0.59
COL11A1P12107 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.71■□□□□ 0.59
COL11A1P12107 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL11A1P12107 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.71■□□□□ 0.59
COL11A1P12107 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.71■□□□□ 0.59
COL11A1P12107 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL11A1P12107 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COL11A1P12107 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.7■□□□□ 0.58
COL11A1P12107 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COL11A1P12107 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 AL136982.4-201ENST00000437689 1740 ntBASIC18.7■□□□□ 0.58
COL11A1P12107 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.7■□□□□ 0.58
COL11A1P12107 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.7■□□□□ 0.58
COL11A1P12107 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.7■□□□□ 0.58
COL11A1P12107 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.7■□□□□ 0.58
COL11A1P12107 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.7■□□□□ 0.58
COL11A1P12107 AL365330.1-201ENST00000607459 531 ntBASIC18.7■□□□□ 0.58
COL11A1P12107 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.7■□□□□ 0.58
COL11A1P12107 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
COL11A1P12107 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 AP001094.4-201ENST00000579008 2176 ntBASIC18.7■□□□□ 0.58
COL11A1P12107 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.7■□□□□ 0.58
COL11A1P12107 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.7■□□□□ 0.58
COL11A1P12107 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.7■□□□□ 0.58
COL11A1P12107 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.7■□□□□ 0.58
COL11A1P12107 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.7■□□□□ 0.58
COL11A1P12107 IGHV3-71-201ENST00000523324 359 ntBASIC18.7■□□□□ 0.58
COL11A1P12107 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.7■□□□□ 0.58
COL11A1P12107 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.7■□□□□ 0.58
COL11A1P12107 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.7■□□□□ 0.58
COL11A1P12107 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL11A1P12107 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COL11A1P12107 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.7■□□□□ 0.58
COL11A1P12107 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.7■□□□□ 0.58
COL11A1P12107 CHCHD2P3-201ENST00000603038 451 ntBASIC18.7■□□□□ 0.58
COL11A1P12107 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL11A1P12107 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL11A1P12107 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.69■□□□□ 0.58
COL11A1P12107 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL11A1P12107 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.69■□□□□ 0.58
COL11A1P12107 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.69■□□□□ 0.58
COL11A1P12107 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
COL11A1P12107 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COL11A1P12107 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
COL11A1P12107 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL11A1P12107 AC079776.1-201ENST00000401540 1152 ntBASIC18.69■□□□□ 0.58
COL11A1P12107 AZGP1P1-201ENST00000411909 902 ntBASIC18.69■□□□□ 0.58
COL11A1P12107 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL11A1P12107 GIMAP3P-201ENST00000495150 836 ntBASIC18.69■□□□□ 0.58
COL11A1P12107 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.69■□□□□ 0.58
COL11A1P12107 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.69■□□□□ 0.58
COL11A1P12107 AC023310.3-201ENST00000557027 670 ntBASIC18.69■□□□□ 0.58
COL11A1P12107 AC100756.1-201ENST00000562736 682 ntBASIC18.69■□□□□ 0.58
COL11A1P12107 AC138749.3-201ENST00000567691 622 ntBASIC18.69■□□□□ 0.58
COL11A1P12107 MIR4321-201ENST00000592276 80 ntBASIC18.69■□□□□ 0.58
COL11A1P12107 AC116165.1-201ENST00000611806 668 ntBASIC18.69■□□□□ 0.58
COL11A1P12107 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COL11A1P12107 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL11A1P12107 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL11A1P12107 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms