Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 AC008894.3-201ENST00000624324 3103 ntBASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.94□□□□□ -0.18
IGHV3-43DP0DP04 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 OR7E14P-202ENST00000530490 1290 ntBASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 DOC2GP-204ENST00000639052 2548 ntBASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.93□□□□□ -0.18
IGHV3-43DP0DP04 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 AC005052.1-201ENST00000625181 2492 ntBASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 LAGE3P1-201ENST00000425356 484 ntBASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 PAWRP1-201ENST00000451083 565 ntBASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 AC087163.2-201ENST00000457299 853 ntBASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 AC006557.2-201ENST00000592985 1240 ntBASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 TP73-AS1-207ENST00000624167 988 ntBASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 AC107918.4-202ENST00000641623 219 ntBASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.92□□□□□ -0.18
IGHV3-43DP0DP04 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms