Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CTSDP07339 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CTSDP07339 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
CTSDP07339 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.93□□□□□ -0.18
CTSDP07339 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CTSDP07339 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CTSDP07339 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.93□□□□□ -0.18
CTSDP07339 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.92□□□□□ -0.18
CTSDP07339 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CTSDP07339 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.92□□□□□ -0.18
CTSDP07339 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CTSDP07339 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.92□□□□□ -0.18
CTSDP07339 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 AP005117.1-202ENST00000581724 1908 ntBASIC13.92□□□□□ -0.18
CTSDP07339 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.92□□□□□ -0.18
CTSDP07339 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 AC117947.1-201ENST00000427448 529 ntBASIC13.92□□□□□ -0.18
CTSDP07339 AC246785.2-201ENST00000432512 513 ntBASIC13.92□□□□□ -0.18
CTSDP07339 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.92□□□□□ -0.18
CTSDP07339 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.92□□□□□ -0.18
CTSDP07339 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.92□□□□□ -0.18
CTSDP07339 KRT18P21-201ENST00000515767 1272 ntBASIC13.92□□□□□ -0.18
CTSDP07339 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.92□□□□□ -0.18
CTSDP07339 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.92□□□□□ -0.18
CTSDP07339 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CTSDP07339 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSDP07339 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.92□□□□□ -0.18
CTSDP07339 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSDP07339 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSDP07339 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSDP07339 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.92□□□□□ -0.18
CTSDP07339 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.92□□□□□ -0.18
CTSDP07339 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CTSDP07339 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CTSDP07339 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.91□□□□□ -0.18
CTSDP07339 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.91□□□□□ -0.18
CTSDP07339 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 AC068587.6-202ENST00000641839 5619 ntBASIC13.91□□□□□ -0.18
CTSDP07339 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSDP07339 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CTSDP07339 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CTSDP07339 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 RCN1P1-201ENST00000400413 996 ntBASIC13.91□□□□□ -0.18
CTSDP07339 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.91□□□□□ -0.18
CTSDP07339 TSPY22P-201ENST00000427496 604 ntBASIC13.91□□□□□ -0.18
CTSDP07339 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.91□□□□□ -0.18
CTSDP07339 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.91□□□□□ -0.18
CTSDP07339 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.91□□□□□ -0.18
CTSDP07339 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.91□□□□□ -0.18
CTSDP07339 RN7SL850P-201ENST00000579959 291 ntBASIC13.91□□□□□ -0.18
CTSDP07339 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CTSDP07339 IGHV3-41-201ENST00000613121 348 ntBASIC13.91□□□□□ -0.18
CTSDP07339 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms